back to first page[..][[BR]] = Work program - Spain = 1. Installing all the tools to use the results of EDA model * Software required - PostgresSQL, QGIS, PostGIS [[BR]] '''PostgreSQL''': http://www.postgresql.org/ [[BR]] '''QGIS''' http://www.qgis.org/ [[BR]] '''PostGIS''' http://postgis.refractions.net/download/windows/ [[BR]] - Eclipse (StatET perspective), SVN and R [[BR]] '''Eclipse''' http://www.eclipse.org/downloads/ [[BR]] '''StatET''' perspective: We need to install a new software in Eclipse: StatET (repository: http://www.walware.de/goto/statet) [[BR]] Go to Help --> Install New Software and there click on Add: [[BR]] Name: StatET [[BR]] Site: http://download.walware.de/Eclipse3.7 (because we have this version of Eclipse intalled in the server. Otherwise, download the corresponding file) [[BR]] Next step is to chose all the type filter text and click Next. It takes a while installing all these things [[BR]] '''SVN''' Then we need to open a new project, called EDA as an StatET perspective and then we will need to install SVN in Eclipse in order to restore this folder directly from Céline's directory [[BR]] To do so, we need to install new software again, following the same steps of the previous installation, but now using the name:SVN and the location: http://subclipse.tigris.org/update_1.6.x [[BR]] '''R''': http://cran.r-project.org/bin/windows/base/ --> last version installed R 2.14.1 [[BR]] Installation of the R Packages of RJ and rJava (the last one directly by using the install packages on R) [[BR]] It is important to pick the RJ package version/repository compatible to the used StatET version! [[BR]] To install the package from the repository, use the following command in a common R Term console: [[BR]] For RJ 1.0 (StatET 2.0): install.packages(c("rj", "rj.gd"), repos="http://download.walware.de/rj-1.0") [[BR]] Once everything is installed, we need to import the files (EDA/trunk and EDAData) from the repository (svn://svn.eptb-vilaine.fr) [[BR]] To do so: we need to right click on the project and select import from SVN (Checkout Projects from SVN) by using the repository given above [[BR]] Finally, we need to configure the run in an R console. To do so we need to click on the run button, select 'Run configuration' and the following window will be opened and should be completed as it is in the next image: [[BR]] Image (source(data)) [[BR]] We need to go to the R Config slide and Add a new configuration with the details shown in the next figure: [[BR]] Image (source...) [[BR]] - Access to the trac –a password is required and has been created for each partners [[BR]] - Teamviewer6 to make easier exchanges between partners http://www.teamviewer.com/es/download/currentversion.aspx [[BR]] * Scripts and Code - R Scripts - Installing package to use in R - Database and tables to install into Postgres 2. Presentation of EDA methodology * EDA database building and GIS stuff - Electrofishing - Obstacle - Land Cover - Other… * GAM delta-gamma model - Dataframe building from EDA2.0 database - Models fitting * Graphics tools 3. Basque EMU application * Run the EDA program (practical) * Results transfer from POSE project * Discussion of the result (Limitation of the model) This project is still in progress, there are some limitations to use the result of EDA. 4. Spain application * Identify steps to apply EDA to the whole of Spain. * Identify the data required to run the model (electro-fishing and dams if it’s possible in the best format) 5. Help on a EDA presentation for the post-evaluation report 6. Future collaborations * Requirement * Resources ["Saving and loading the database with Eider"][[BR]] ["Spain dbeel"][[BR]] ["Spain electrofishing data"][[BR]] ["Spain clc"][[BR]] ["Spain dams"][[BR]]