wiki:SIBIC database

Version 22 (modified by maria, 7 years ago) (diff)

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The SIBIC database

http://www.sibic.org/

Related tickets

#86 and #94

Connexion scripts

ODBC connexions have been set up to connect to the SIBIC.
This require R 32bits to run via Rterm in eclipse, and setting up and ODBC link in C:\Windows\System32 (not the 64 bit version).
They are different: https://robertoschiabel.wordpress.com/2008/02/28/windows-x64-32bit-odbc-vs-64bit-odbc/

You can find the code in: source:/eda/sudoang/SIBIC.R

SIBIC data structure

source:eda/data/Docs/trac/sudoang/location_diagram.png

Location

codhb
subbassin
stretch_place
place_classification
responsible_entity
regional_delegation
human_intervention_pt
human_intervention_es
fishing_level
coordenadasXX
coordenadasYY
locationid
ES
PT
Gen_fishing_level
medium_number_of_eggs
Gen_place_classification
idref
spec_loc_id
Observaciones
s_Generation
s_GUID

Notes: "place_classification" indicates the code of the station inherited from the primary resources.

Hydrobass

codhb
HydrographicBasin_PT
HydrographicBasin_ES
s_Generation
s_GUID
ES
PT

Notes: there is a problem with the assignment of the country (HydrographicBasin_PT and HydrographicBasin_ES).

Species_Location

locationid
codspecies
capture_date
capture_year
abundance_order
Time1
Time2
Time3
Run1
Run2
Run3
length
width
Area
ind/ha
ind/hour
abundance_CPUE
unit_CPUE
efficiency
methods
s_Generation
population_tendencies
s_GUID
reproduction_season
MatSex_male
MatSex_female
medium_number_of_eggs
idref
spec_loc_id

Notes: the format of the most of parameters have to be standardized.